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Mobile Genetic Elements

 

 

Selection of publications

 

 

 

34 -
Sharma V, Prère MF, Canal I, Firth AE, Atkins JF, Baranov PV, Fayet O. Analysis of tetra- and hepta-nucleotides motifs promoting -1 ribosomal frameshifting in Escherichia coli. Nucleic Acids Res. 2014 Jul 1;42(11):7210-25 (Medline)
33 -
Siguier P, Gourbeyre E, Chandler M. Bacterial insertion sequences: their genomic impact and diversity. FEMS Microbiol Rev. 2014 Feb 6 (Medline)
32 -
Guérillot R, Siguier P, Gourbeyre E, Chandler M, Glaser P.The diversity of prokaryotic DDE transposases of the mutator superfamily, insertion specificity, and association with conjugation machineries. Genome Biol Evol. 2014;6(2):260-72.(Medline)
31 -
He S, Guynet C, Siguier P, Hickman AB, Dyda F, Chandler M, Ton-Hoang B. IS200/IS605 family single-strand transposition: mechanism of IS608 strand transfer. Nucleic Acids Res. 2013 Mar 1;41(5):3302-13
30 -
Michael Chandler, Fernando de la Cruz, Fred Dyda, Alison B. Hickman, Gabriel Moncalian, Bao Ton-Hoang. Breaking and joining single-stranded DNA: the HUH endonuclease superfamily. Nat Rev Microbiol. 2013 Aug;11(8)
29 -
Pasternak C, Dulermo R, Ton-Hoang B, Debuchy R, Siguier P, Coste G,Chandler M, Sommer S. ISDra2 transposition in Deinococcus radiodurans is downregulated by TnpB. Mol Microbiol. 2013 Apr;88(2):443-55
28 -
Ton-Hoang B, Siguier P, Quentin Y, Onillon S, Marty B, Fichant G, Chandler M. Structuring the bacterial genome: Y1-transposases associated with REP-BIME sequences. Nucleic Acids Res. 2012 Apr;40(8):3596-609.
27 -
Dyda, F., Chandler, M. and Hickman, A. (2012) The Emerging Diversity of Transpososome Architectures. Quart. Rev. Biophys. 45, 493-521
26 -
Messing SA, Ton-Hoang B, Hickman AB, McCubbin AJ, Peaslee GF, Ghirlando R, Chandler M, Dyda F. The processing of repetitive extragenic palindromes: the structure of a repetitive extragenic palindrome bound to its associated nuclease. Nucleic Acids Res. 2012 Oct;40(19):9964-79.
25 -
Toussaint, A., Chandler, M. Prokaryote Genome Fluidity: Towards a System Approach of the Mobilome. (2012). In Bacterial Molecular Networks (Eds. Jacques van Helden , Ariane Toussaint, Denis Thieffry) Methods in Molecular Biology 804, pp57-780
24 -
Varani, A.M., Siguier, P, Gourbeyre, E, Charneau, V and Chandler, M. (2011).ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes. Genome Biol, 12, R30.
23 -
Duval-Valentin G, Chandler M. Cotranslational control of DNA transposition: a window of opportunity.Mol Cell. 2011 Dec 23;44(6):989-96.
22 -
Prère MF, Canal I, Wills NM, Atkins JF, Fayet O. (2011). The interplay of mRNA stimulatory signals required for AUU-mediated initiation and programmed -1 ribosomal frameshifting in decoding of transposable element IS911. J Bacteriol. 2011 Jun;193(11):2735-44
21 -
Sharma V, Firth AE, Antonov I, Fayet O, Atkins JF, Borodovsky M, Baranov PV. (2011). A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment. Mol Biol Evol. Nov;28(11):3195-211
20 -
Kichenaradja, P., Siguier, P, Pérochon, J and Chandler, M. (2010).ISbrowser: an extension of ISfinder for visualizing insertion sequences in prokaryotic genomes. Nucleic Acids Res, 38, D62-8.
19 -
Pasternak, C., Ton-Hoang, B, Coste, G, Bailone, A, Chandler, M and Sommer, S. (2010). Irradiation-induced Deinococcusradiodurans genome fragmentation triggers transposition of a single resident insertion sequence. PLoS Genet. 2010 Jan 15;6(1)
18 -
Hickman, A.B., Chandler, M and Dyda, F. (2010).Integrating prokaryotes and eukaryotes: DNA transposases in light of structure. Crit Rev BiochemMolBiol, 45, 50-69.
17 -
Hickman, A.B., James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S and Dyda, F. (2010).DNA recognition and the precleavage state during single-stranded DNA transposition in D. radiodurans.EMBO J, 29, 3840-3852.
16 -
Ton-Hoang, B., Pasternak, C, Siguier, P, Guynet, C, Hickman, A.B, Dyda, F, Sommer, S and Chandler, M. (2010). Single-stranded DNA transposition is coupled to host replication. Cell, 142, 398-408.
15 -
Kthiri F, Gautier V, Le HT, Prère MF, Fayet O, Malki A, Landoulsi A, Richarme G.(2010). Translational defects in a mutant deficient in YajL, the bacterial homolog of the parkinsonism-associated protein DJ-1. J Bacteriol. 2010 Dec;192(23):6302-6
14 -
Filée, J. and Chandler, M. (2010).Gene exchange and the origin of giant viruses.Intervirology, 53, 354-361.
13 -
Gourbeyre, E., Siguier, P and Chandler, M. (2010).Route 66: investigations into the organisation and distribution of the IS66 family of prokaryotic insertion sequences.Res Microbiol, 161, 136-143.
12 -
Guynet, C., Achard, A., Ton Hoang B., Barabas, O., Burgess Hickman, A., Dyda, F. and Chandler, M. Resetting the site: Redirecting integration of an insertion sequence in a predictable way. Mol.Cell (2009) Jun 12;34(5):612-9.
11 -
Siguier P., Gagnevin L. and Chandler M. The new IS1595 family, its Relation to IS1 and the frontier between insertion sequences and transposons. (2009) Res Microbiol. 2009 Apr;160(3):232-41
10 -
Barabas O,. Ronning D R., Guynet C., Hickman A B, Ton-Hoang B, Chandler M., Dyda F. Mechanism of IS200/IS605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection. Cell (2008) 132: 208-220.
9 -
Filée J. and Chandler M. Convergent Mechanisms of Genome Evolution of Large and Giant DNA Viruses. Res Microbiol. 2008 May 10. [Epub ahead of print] PMID: 18572389
8 -
Guynet C, Hickman A B, Barabás O, Dyda F, Chandler M and Ton-Hoang B. Single-stranded transposition of IS608: in vitro reconstitution of a new transposition mechanism. Mol. Cell (2008) 29: 302-312.
7 -
Filee J, Siguier P, Chandler M. Insertion sequence diversity in archaea. Microbiol Mol Biol Rev. (2007) Mar;71(1):121-57. Medline
6 -
Filee J, Siguier P, Chandler M. I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses. Trends Genet. (2007) Jan;23(1):10-5. Medline
5 -
Rousseau P, Loot C, Guynet C, Ah-Seng Y, Ton-Hoang B, Chandler M. Control of IS911 target selection: how OrfA may ensure IS dispersion. Mol Microbiol. (2007) Mar;63(6):1701-9. Medline
4 -
Gueguen E, Rousseau P, Duval-Valentin G, Chandler M. Truncated forms of IS911 transposase downregulate transposition. Mol Microbiol. (2006) Nov;62(4):1102-16. Medline
3 -
Chandler M (2006) Singled out for integration (News and Views)Nature 440 (7088): 1121-1122
2 -
Pouget, N.,. Turlan, C., Destainville, N., Salomé, L. and Chandler, M. (2006) IS911 transpososome assembly as analysed by Tethered Particle Motion. Nucleic Acids Res. Nucleic Acids Res. 2006;34(16):4313-23.
1 -
Siguier, P., Filé, J. and Chandler, M. (2006) Insertion sequences in Bacterial Genomes. Cur. Op. Microbiol. 2006 Oct;9(5):526-31.

 

 

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